Carnation DB

Dca19298.1

Annotation

5-exons
f-1
sp|B9I8G8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_834740#unknown#0F0P0C
sp|B9RDP4_RICCO#Remorin, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1614760#unknown#0F0P0C
Repeat List (scaffold200)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19298.1	1	191	191	64.39	191	61	1e-54
Target_name	Start	End	Length	Cov(%)
sp\|B9I8G8_POPTR	1	193	193	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19298.1	29	191	191	52.87	163	61	3e-49
Target_name	Start	End	Length	Cov(%)
AT3G61260.1	46	212	212	78.77

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold200	Augus-PASA	mRNA	174274	177059	.	-	.	ID=Dca19298.1;Parent=Dca19298
scaffold200	Augus-PASA	exon	174274	174468	.	-	.	ID=Dca19298.1.exon1;Parent=Dca19298.1
scaffold200	Augus-PASA	exon	174608	174689	.	-	.	ID=Dca19298.1.exon2;Parent=Dca19298.1
scaffold200	Augus-PASA	exon	175816	175903	.	-	.	ID=Dca19298.1.exon3;Parent=Dca19298.1
scaffold200	Augus-PASA	exon	176113	176187	.	-	.	ID=Dca19298.1.exon4;Parent=Dca19298.1
scaffold200	Augus-PASA	exon	176924	177059	.	-	.	ID=Dca19298.1.exon5;Parent=Dca19298.1