Carnation DB

Dca1938.1

Annotation

10-exons
f-1
sp|D7TCZ6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VIT_00s0434g00080#GO:0004190;GO:0006508#1F1P0C
sp|B9T721_RICCO#Aspartic proteinase nepenthesin-2, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0311060#GO:0004190;GO:0006508#1F1P0C
Repeat List (scaffold1063)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1938.1	1	474	495	65.45	474	69	0
Target_name	Start	End	Length	Cov(%)
sp\|D7TCZ6_VITVI	30	489	518	88.8

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1938.1	1	463	495	61.01	463	65	6e-178
Target_name	Start	End	Length	Cov(%)
AT4G35880.1	33	486	524	86.64

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1063	Augus-PASA	mRNA	4399	7469	.	+	.	ID=Dca1938.1;Parent=Dca1938
scaffold1063	Augus-PASA	exon	4399	4655	.	+	.	ID=Dca1938.1.exon1;Parent=Dca1938.1
scaffold1063	Augus-PASA	exon	4901	5036	.	+	.	ID=Dca1938.1.exon2;Parent=Dca1938.1
scaffold1063	Augustus	exon	5136	5371	.	+	.	ID=Dca1938.1.exon3;Parent=Dca1938.1
scaffold1063	Augustus	exon	5692	5916	.	+	.	ID=Dca1938.1.exon4;Parent=Dca1938.1
scaffold1063	Augustus	exon	6033	6168	.	+	.	ID=Dca1938.1.exon5;Parent=Dca1938.1
scaffold1063	Augustus	exon	6246	6319	.	+	.	ID=Dca1938.1.exon6;Parent=Dca1938.1
scaffold1063	Augustus	exon	6410	6509	.	+	.	ID=Dca1938.1.exon7;Parent=Dca1938.1
scaffold1063	Augustus	exon	6611	6668	.	+	.	ID=Dca1938.1.exon8;Parent=Dca1938.1
scaffold1063	Augustus	exon	7131	7202	.	+	.	ID=Dca1938.1.exon9;Parent=Dca1938.1
scaffold1063	Augustus	exon	7276	7469	.	+	.	ID=Dca1938.1.exon10;Parent=Dca1938.1