Carnation DB

Dca1940.1

Annotation

6-exons
f-1
sp|F6HD50_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VIT_00s0510g00040#GO:0005634#0F0P1C
sp|B9T718_RICCO#Pre-rRNA-processing protein ESF1, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0310730#GO:0005634#0F0P1C
Repeat List (scaffold1063)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1940.1	13	222	726	13.77	210	42	1e-32
Target_name	Start	End	Length	Cov(%)
sp\|F6HD50_VITVI	28	251	726	30.85

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1940.1	170	213	726	3.99	44	66	2e-11
Target_name	Start	End	Length	Cov(%)
AT3G01160.1	212	255	713	6.17

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1063	Augustus	mRNA	16023	19868	.	-	.	ID=Dca1940.1;Parent=Dca1940
scaffold1063	Augustus	exon	16023	16329	.	-	.	ID=Dca1940.1.exon1;Parent=Dca1940.1
scaffold1063	Augustus	exon	16517	17133	.	-	.	ID=Dca1940.1.exon2;Parent=Dca1940.1
scaffold1063	Augustus	exon	17519	17647	.	-	.	ID=Dca1940.1.exon3;Parent=Dca1940.1
scaffold1063	Augustus	exon	17784	17946	.	-	.	ID=Dca1940.1.exon4;Parent=Dca1940.1
scaffold1063	Augustus	exon	18114	18565	.	-	.	ID=Dca1940.1.exon5;Parent=Dca1940.1
scaffold1063	Augustus	exon	19356	19868	.	-	.	ID=Dca1940.1.exon6;Parent=Dca1940.1