Carnation DB

Dca1944.1

Annotation

7-exons
f-1
sp|B9MXC9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_827043#unknown#0F0P0C
AT4G35920.1 | Symbols: MCA1 | PLAC8 family protein | chr4:17012106-17014192 REVERSE LENGTH=421
Repeat List (scaffold1063)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1944.1	4	409	409	73.1	406	73	7e-169
Target_name	Start	End	Length	Cov(%)
sp\|B9MXC9_POPTR	7	419	419	98.56

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1944.1	3	408	409	70.66	406	70	7e-165
Target_name	Start	End	Length	Cov(%)
AT4G35920.1	7	420	421	98.33

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1063	Augustus	mRNA	62763	66183	.	-	.	ID=Dca1944.1;Parent=Dca1944
scaffold1063	Augustus	exon	62763	62815	.	-	.	ID=Dca1944.1.exon1;Parent=Dca1944.1
scaffold1063	Augustus	exon	62994	63087	.	-	.	ID=Dca1944.1.exon2;Parent=Dca1944.1
scaffold1063	Augustus	exon	63455	63561	.	-	.	ID=Dca1944.1.exon3;Parent=Dca1944.1
scaffold1063	Augustus	exon	63912	63983	.	-	.	ID=Dca1944.1.exon4;Parent=Dca1944.1
scaffold1063	Augustus	exon	64135	64244	.	-	.	ID=Dca1944.1.exon5;Parent=Dca1944.1
scaffold1063	Augustus	exon	64348	64742	.	-	.	ID=Dca1944.1.exon6;Parent=Dca1944.1
scaffold1063	Augustus	exon	65785	66183	.	-	.	ID=Dca1944.1.exon7;Parent=Dca1944.1