Dca19455.1
Annotation
- 2-exons
- f-1405
- sp|Q9ZQ67_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g14380#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold2011)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19455.1 |
109 |
207 |
207 |
20.77 |
99 |
44 |
9e-21
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q8S941_SILLA |
79 |
177 |
196 |
50.51 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19455.1 |
12 |
158 |
176 |
29.54 |
147 |
35 |
2e-19
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0439900-01 |
162 |
312 |
421 |
35.86 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2011 |
Augustus |
mRNA |
88729 |
90777 |
. |
+ |
. |
ID=Dca19455.1;Parent=Dca19455 |
| scaffold2011 |
Augustus |
exon |
88729 |
89351 |
. |
+ |
. |
ID=Dca19455.1.exon1;Parent=Dca19455.1 |
| scaffold2011 |
Augustus |
exon |
89466 |
90777 |
. |
+ |
. |
ID=Dca19455.1.exon2;Parent=Dca19455.1 |
