Dca19478.1
Annotation
- 3-exons
- f-2
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Os09t0122300-01 Similar to Zinc knuckle family protein.
- Repeat List (scaffold20139)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19478.1 |
1 |
639 |
748 |
38.36 |
639 |
41 |
3e-120
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
27 |
728 |
1717 |
40.88 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19478.1 |
445 |
511 |
748 |
3.07 |
67 |
35 |
3e-06
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os09t0122300-01 |
77 |
142 |
150 |
44 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold20139 |
Augustus |
mRNA |
243 |
2650 |
. |
- |
. |
ID=Dca19478.1;Parent=Dca19478 |
| scaffold20139 |
Augustus |
exon |
243 |
940 |
. |
- |
. |
ID=Dca19478.1.exon1;Parent=Dca19478.1 |
| scaffold20139 |
Augustus |
exon |
1030 |
2337 |
. |
- |
. |
ID=Dca19478.1.exon2;Parent=Dca19478.1 |
| scaffold20139 |
Augustus |
exon |
2409 |
2650 |
. |
- |
. |
ID=Dca19478.1.exon3;Parent=Dca19478.1 |
