Carnation DB

Dca19561.1

Annotation

7-exons
f-1
sp|A5ATM4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_042181#GO:0003723#1F0P0C
AT5G46190.1 | Symbols: | RNA-binding KH domain-containing protein | chr5:18723435-18725834 REVERSE LENGTH=644
Repeat List (scaffold202)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19561.1	1	663	663	59.27	663	59	0
Target_name	Start	End	Length	Cov(%)
sp\|A5ATM4_VITVI	1	637	637	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19561.1	21	663	663	49.92	643	51	3e-158
Target_name	Start	End	Length	Cov(%)
AT5G46190.1	33	644	644	95.03

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold202	Augustus	mRNA	159170	162245	.	-	.	ID=Dca19561.1;Parent=Dca19561
scaffold202	Augustus	exon	159170	159301	.	-	.	ID=Dca19561.1.exon1;Parent=Dca19561.1
scaffold202	Augustus	exon	159472	159568	.	-	.	ID=Dca19561.1.exon2;Parent=Dca19561.1
scaffold202	Augustus	exon	159686	159738	.	-	.	ID=Dca19561.1.exon3;Parent=Dca19561.1
scaffold202	Augustus	exon	159961	160365	.	-	.	ID=Dca19561.1.exon4;Parent=Dca19561.1
scaffold202	Augus-PASA	exon	160508	160738	.	-	.	ID=Dca19561.1.exon5;Parent=Dca19561.1
scaffold202	Augus-PASA	exon	160980	161468	.	-	.	ID=Dca19561.1.exon6;Parent=Dca19561.1
scaffold202	Augus-PASA	exon	161661	162245	.	-	.	ID=Dca19561.1.exon7;Parent=Dca19561.1