Carnation DB

Dca19567.1

Annotation

8-exons
f-1
sp|B9GZJ5_POPTR#Shikimate kinase-like protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=SKL#GO:0005524;GO:0004765#2F0P0C
Repeat List (scaffold2020)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19567.1	57	375	384	57.55	319	70	3e-126
Target_name	Start	End	Length	Cov(%)
sp\|B9GZJ5_POPTR	61	378	384	82.81

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19567.1	9	377	384	57.55	369	59	2e-114
Target_name	Start	End	Length	Cov(%)
AT2G35500.1	7	380	387	96.64

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2020	Augustus	mRNA	4436	8423	.	-	.	ID=Dca19567.1;Parent=Dca19567
scaffold2020	Augustus	exon	4436	4545	.	-	.	ID=Dca19567.1.exon1;Parent=Dca19567.1
scaffold2020	Augustus	exon	5017	5193	.	-	.	ID=Dca19567.1.exon2;Parent=Dca19567.1
scaffold2020	Augustus	exon	5715	5833	.	-	.	ID=Dca19567.1.exon3;Parent=Dca19567.1
scaffold2020	Augustus	exon	5915	5981	.	-	.	ID=Dca19567.1.exon4;Parent=Dca19567.1
scaffold2020	Augustus	exon	6542	6603	.	-	.	ID=Dca19567.1.exon5;Parent=Dca19567.1
scaffold2020	Augustus	exon	7120	7314	.	-	.	ID=Dca19567.1.exon6;Parent=Dca19567.1
scaffold2020	Augustus	exon	7394	7587	.	-	.	ID=Dca19567.1.exon7;Parent=Dca19567.1
scaffold2020	Augustus	exon	8193	8423	.	-	.	ID=Dca19567.1.exon8;Parent=Dca19567.1