Carnation DB

Dca19792.1

Annotation

22-exons
f-1
sp|F6HLJ9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g06370#GO:0005524;GO:0003677;GO:0004386;GO:0006355#3F1P0C
Os02t0689800-01 Similar to DEAD/DEAH box helicase domain-containing protein PIE1.
Repeat List (scaffold204)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19792.1	72	197	2141	4.48	126	63	1e-44
Target_name	Start	End	Length	Cov(%)
sp\|F6HLJ9_VITVI	21	173	2052	7.45

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19792.1	72	2055	2141	53.94	1984	57	0
Target_name	Start	End	Length	Cov(%)
AT3G12810.1	34	1985	2055	94.98

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold204	Augustus	mRNA	8121	23290	.	-	.	ID=Dca19792.1;Parent=Dca19792
scaffold204	Augustus	exon	8121	8556	.	-	.	ID=Dca19792.1.exon1;Parent=Dca19792.1
scaffold204	Augustus	exon	9060	9583	.	-	.	ID=Dca19792.1.exon2;Parent=Dca19792.1
scaffold204	Augustus	exon	10324	11113	.	-	.	ID=Dca19792.1.exon3;Parent=Dca19792.1
scaffold204	Augustus	exon	11202	11269	.	-	.	ID=Dca19792.1.exon4;Parent=Dca19792.1
scaffold204	Augustus	exon	11356	11420	.	-	.	ID=Dca19792.1.exon5;Parent=Dca19792.1
scaffold204	Augustus	exon	12187	15253	.	-	.	ID=Dca19792.1.exon6;Parent=Dca19792.1
scaffold204	Augustus	exon	15338	15400	.	-	.	ID=Dca19792.1.exon7;Parent=Dca19792.1
scaffold204	Augustus	exon	15506	15574	.	-	.	ID=Dca19792.1.exon8;Parent=Dca19792.1
scaffold204	Augustus	exon	16162	16200	.	-	.	ID=Dca19792.1.exon9;Parent=Dca19792.1
scaffold204	Augustus	exon	16547	16678	.	-	.	ID=Dca19792.1.exon10;Parent=Dca19792.1
scaffold204	Augustus	exon	16767	16825	.	-	.	ID=Dca19792.1.exon11;Parent=Dca19792.1
scaffold204	Augustus	exon	16960	17040	.	-	.	ID=Dca19792.1.exon12;Parent=Dca19792.1
scaffold204	Augustus	exon	17172	17307	.	-	.	ID=Dca19792.1.exon13;Parent=Dca19792.1
scaffold204	Augustus	exon	18667	18746	.	-	.	ID=Dca19792.1.exon14;Parent=Dca19792.1
scaffold204	Augustus	exon	18843	19031	.	-	.	ID=Dca19792.1.exon15;Parent=Dca19792.1
scaffold204	Augustus	exon	19127	19263	.	-	.	ID=Dca19792.1.exon16;Parent=Dca19792.1
scaffold204	Augustus	exon	19395	19483	.	-	.	ID=Dca19792.1.exon17;Parent=Dca19792.1
scaffold204	Augustus	exon	20166	20273	.	-	.	ID=Dca19792.1.exon18;Parent=Dca19792.1
scaffold204	Augustus	exon	20362	20442	.	-	.	ID=Dca19792.1.exon19;Parent=Dca19792.1
scaffold204	Augustus	exon	21345	21423	.	-	.	ID=Dca19792.1.exon20;Parent=Dca19792.1
scaffold204	Augustus	exon	22186	22280	.	-	.	ID=Dca19792.1.exon21;Parent=Dca19792.1
scaffold204	Augustus	exon	23252	23290	.	-	.	ID=Dca19792.1.exon22;Parent=Dca19792.1