Carnation DB

Dca19797.1

Annotation

6-exons
f-1
sp|F6H1D6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g11080#GO:0003676;GO:0000166#2F0P0C
AT1G47490.1 | Symbols: ATRBP47C, RBP47C | RNA-binding protein 47C | chr1:17424801-17427182 FORWARD LENGTH=432
Repeat List (scaffold204)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19797.1	32	447	447	63.75	416	68	3e-158
Target_name	Start	End	Length	Cov(%)
sp\|F6H1D6_VITVI	32	418	418	92.58

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19797.1	19	447	447	60.85	429	63	4e-144
Target_name	Start	End	Length	Cov(%)
AT1G47490.1	39	432	432	91.2

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold204	Augus-PASA	mRNA	77680	81045	.	+	.	ID=Dca19797.1;Parent=Dca19797
scaffold204	Augus-PASA	exon	77680	78102	.	+	.	ID=Dca19797.1.exon1;Parent=Dca19797.1
scaffold204	Augus-PASA	exon	79301	79766	.	+	.	ID=Dca19797.1.exon2;Parent=Dca19797.1
scaffold204	Augus-PASA	exon	80198	80265	.	+	.	ID=Dca19797.1.exon3;Parent=Dca19797.1
scaffold204	Augus-PASA	exon	80351	80481	.	+	.	ID=Dca19797.1.exon4;Parent=Dca19797.1
scaffold204	Augus-PASA	exon	80597	80693	.	+	.	ID=Dca19797.1.exon5;Parent=Dca19797.1
scaffold204	Augus-PASA	exon	80887	81045	.	+	.	ID=Dca19797.1.exon6;Parent=Dca19797.1