Dca19842.1
Annotation
- 2-exons
- f-1
- sp|Q2QMT9_ORYSJ#Retrotransposon protein, putative, unclassified#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g40050#unknown#0F0P0C
- Repeat List (scaffold2043)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19842.1 |
1 |
243 |
256 |
34.37 |
243 |
31 |
2e-19
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2QMT9_ORYSJ |
239 |
521 |
989 |
28.61 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19842.1 |
160 |
239 |
256 |
13.28 |
80 |
43 |
6e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| ATMG00820.1 |
3 |
75 |
170 |
42.94 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2043 |
Augustus |
mRNA |
14229 |
16705 |
. |
+ |
. |
ID=Dca19842.1;Parent=Dca19842 |
| scaffold2043 |
Augustus |
exon |
14229 |
14478 |
. |
+ |
. |
ID=Dca19842.1.exon1;Parent=Dca19842.1 |
| scaffold2043 |
Augustus |
exon |
16185 |
16705 |
. |
+ |
. |
ID=Dca19842.1.exon2;Parent=Dca19842.1 |
