Dca19843.1
Annotation
- 2-exons
- f-1
- sp|C5YJL0_SORBI#Putative uncharacterized protein Sb07g008525#Sorghum bicolor (Sorghum) (Sorghum vulgare)#Name=Sb07g008525#unknown#0F0P0C
- sp|Q2R3U8_ORYSJ#Retrotransposon protein, putative, unclassified#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os11g30700#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold2043)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19843.1 |
1 |
62 |
77 |
58.44 |
62 |
73 |
2e-22
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|H2D842_CHEQI |
2 |
63 |
88 |
70.45 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19843.1 |
1 |
61 |
77 |
38.96 |
61 |
47 |
3e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
198 |
262 |
1262 |
5.15 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2043 |
Augustus |
mRNA |
16841 |
17653 |
. |
+ |
. |
ID=Dca19843.1;Parent=Dca19843 |
| scaffold2043 |
Augustus |
exon |
16841 |
17028 |
. |
+ |
. |
ID=Dca19843.1.exon1;Parent=Dca19843.1 |
| scaffold2043 |
Augustus |
exon |
17251 |
17653 |
. |
+ |
. |
ID=Dca19843.1.exon2;Parent=Dca19843.1 |
