Dca19941.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold2051)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19941.1 |
36 |
177 |
178 |
46.06 |
142 |
58 |
2e-41
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
1349 |
1490 |
1501 |
9.46 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19941.1 |
37 |
176 |
178 |
31.46 |
140 |
40 |
5e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0627900-01 |
87 |
226 |
230 |
60.86 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2051 |
Augustus |
mRNA |
588 |
1681 |
. |
- |
. |
ID=Dca19941.1;Parent=Dca19941 |
| scaffold2051 |
Augustus |
exon |
588 |
1024 |
. |
- |
. |
ID=Dca19941.1.exon1;Parent=Dca19941.1 |
| scaffold2051 |
Augustus |
exon |
1584 |
1681 |
. |
- |
. |
ID=Dca19941.1.exon2;Parent=Dca19941.1 |
