Dca19952.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold2052)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19952.1 |
15 |
140 |
144 |
46.52 |
126 |
54 |
9e-37
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
837 |
962 |
964 |
13.07 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19952.1 |
15 |
130 |
144 |
31.94 |
116 |
40 |
5e-17
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1272 |
1385 |
1401 |
8.13 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2052 |
Augustus |
mRNA |
6258 |
7412 |
. |
- |
. |
ID=Dca19952.1;Parent=Dca19952 |
| scaffold2052 |
Augustus |
exon |
6258 |
6648 |
. |
- |
. |
ID=Dca19952.1.exon1;Parent=Dca19952.1 |
| scaffold2052 |
Augustus |
exon |
7369 |
7412 |
. |
- |
. |
ID=Dca19952.1.exon2;Parent=Dca19952.1 |
