Carnation DB

Dca19956.1

Annotation

5-exons
f-1
sp|D7TIY2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g04300#GO:0016788;GO:0006629#1F1P0C
sp|B9SRK9_RICCO#Zinc finger protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0840120#GO:0016788;GO:0006629#1F1P0C
Repeat List (scaffold2052)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19956.1	1	352	352	72.44	352	73	2e-153
Target_name	Start	End	Length	Cov(%)
sp\|D7TIY2_VITVI	1	351	363	96.69

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19956.1	13	351	352	63.35	339	66	7e-135
Target_name	Start	End	Length	Cov(%)
AT5G03820.1	13	353	354	96.32

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2052	Augus-PASA	mRNA	38255	41440	.	+	.	ID=Dca19956.1;Parent=Dca19956
scaffold2052	Augus-PASA	exon	38255	38498	.	+	.	ID=Dca19956.1.exon1;Parent=Dca19956.1
scaffold2052	Augus-PASA	exon	38657	38787	.	+	.	ID=Dca19956.1.exon2;Parent=Dca19956.1
scaffold2052	Augus-PASA	exon	38879	39112	.	+	.	ID=Dca19956.1.exon3;Parent=Dca19956.1
scaffold2052	Augus-PASA	exon	39873	40128	.	+	.	ID=Dca19956.1.exon4;Parent=Dca19956.1
scaffold2052	Augus-PASA	exon	41247	41440	.	+	.	ID=Dca19956.1.exon5;Parent=Dca19956.1