Dca20002.1
Annotation
- 2-exons
- f-1
- sp|A5AV98_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_015928#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Os08t0125300-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold2056)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca20002.1 |
1 |
172 |
173 |
55.49 |
172 |
46 |
1e-41
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5AV98_VITVI |
491 |
693 |
764 |
26.57 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca20002.1 |
2 |
80 |
173 |
26.58 |
79 |
58 |
3e-22
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
649 |
728 |
1428 |
5.6 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2056 |
Augustus |
mRNA |
18166 |
18794 |
. |
- |
. |
ID=Dca20002.1;Parent=Dca20002 |
| scaffold2056 |
Augustus |
exon |
18166 |
18439 |
. |
- |
. |
ID=Dca20002.1.exon1;Parent=Dca20002.1 |
| scaffold2056 |
Augustus |
exon |
18547 |
18794 |
. |
- |
. |
ID=Dca20002.1.exon2;Parent=Dca20002.1 |
