Carnation DB

Dca20066.1

Annotation

6-exons
f-1
sp|F6HKD0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g04710#GO:0005634;GO:0003676;GO:0008270#2F0P1C
Os03t0263500-01 Similar to Splicing factor 3A subunit 2 (Spliceosome associated protein 62) (SAP 62) (SF3a66).
Repeat List (scaffold206)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20066.1	1	226	329	61.7	226	90	2e-113
Target_name	Start	End	Length	Cov(%)
sp\|F6HKD0_VITVI	1	226	357	63.3

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20066.1	1	224	329	57.44	224	85	2e-106
Target_name	Start	End	Length	Cov(%)
Os03t0263500-01	1	224	322	69.56

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold206	Augus-PASA	mRNA	192528	195611	.	+	.	ID=Dca20066.1;Parent=Dca20066
scaffold206	Augus-PASA	exon	192528	192849	.	+	.	ID=Dca20066.1.exon1;Parent=Dca20066.1
scaffold206	Augus-PASA	exon	193979	194055	.	+	.	ID=Dca20066.1.exon2;Parent=Dca20066.1
scaffold206	Augus-PASA	exon	194158	194223	.	+	.	ID=Dca20066.1.exon3;Parent=Dca20066.1
scaffold206	Augus-PASA	exon	194330	194404	.	+	.	ID=Dca20066.1.exon4;Parent=Dca20066.1
scaffold206	Augus-PASA	exon	194484	194558	.	+	.	ID=Dca20066.1.exon5;Parent=Dca20066.1
scaffold206	Augus-PASA	exon	195237	195611	.	+	.	ID=Dca20066.1.exon6;Parent=Dca20066.1