Dca2017.1
Annotation
- 3-exons
- f-1
- sp|B8BLH7_ORYSI#Putative uncharacterized protein#Oryza sativa subsp indica (Rice)#ORFNames=OsI_36788#GO:0008270#1F0P0C
- Os12t0514100-01 Ribosome associated membrane RAMP4 family protein.
- Repeat List (scaffold10657)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2017.1 |
20 |
86 |
86 |
68.6 |
67 |
89 |
5e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B8BLH7_ORYSI |
506 |
572 |
572 |
11.71 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2017.1 |
20 |
86 |
86 |
69.76 |
67 |
90 |
6e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0514100-01 |
2 |
68 |
69 |
97.1 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold10657 |
Augustus |
mRNA |
8921 |
9460 |
. |
- |
. |
ID=Dca2017.1;Parent=Dca2017 |
| scaffold10657 |
Augustus |
exon |
8921 |
8967 |
. |
- |
. |
ID=Dca2017.1.exon1;Parent=Dca2017.1 |
| scaffold10657 |
Augustus |
exon |
9086 |
9242 |
. |
- |
. |
ID=Dca2017.1.exon2;Parent=Dca2017.1 |
| scaffold10657 |
Augustus |
exon |
9404 |
9460 |
. |
- |
. |
ID=Dca2017.1.exon3;Parent=Dca2017.1 |
