Carnation DB

Dca20290.1

Annotation

5-exons
f-1
sp|B9GNL0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_816437#GO:0016757#1F0P0C
AT4G07960.1 | Symbols: ATCSLC12, CSLC12 | Cellulose-synthase-like C12 | chr4:4802628-4805114 REVERSE LENGTH=699
Repeat List (scaffold208)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20290.1	13	680	681	76.06	668	75	0
Target_name	Start	End	Length	Cov(%)
sp\|B9GNL0_POPTR	12	700	701	98.28

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20290.1	1	681	681	74.74	681	72	0
Target_name	Start	End	Length	Cov(%)
AT4G07960.1	1	699	699	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold208	Augustus	mRNA	42116	45125	.	+	.	ID=Dca20290.1;Parent=Dca20290
scaffold208	Augustus	exon	42116	42841	.	+	.	ID=Dca20290.1.exon1;Parent=Dca20290.1
scaffold208	Augustus	exon	43117	43425	.	+	.	ID=Dca20290.1.exon2;Parent=Dca20290.1
scaffold208	Augustus	exon	43688	43978	.	+	.	ID=Dca20290.1.exon3;Parent=Dca20290.1
scaffold208	Augustus	exon	44282	44395	.	+	.	ID=Dca20290.1.exon4;Parent=Dca20290.1
scaffold208	Augustus	exon	44520	45125	.	+	.	ID=Dca20290.1.exon5;Parent=Dca20290.1