Carnation DB

Dca20351.1

Annotation

5-exons
f-1
sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
sp|Q2AA09_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=20.t00008#GO:0003676;GO:0008270#2F0P0C
Repeat List (scaffold2085)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20351.1	329	651	735	19.18	323	40	1e-56
Target_name	Start	End	Length	Cov(%)
sp\|E2DN01_BETVU	115	456	1717	19.91

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20351.1	27	115	735	5.71	89	48	5e-18
Target_name	Start	End	Length	Cov(%)
ATMG00810.1	96	184	240	37.08

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2085	Augustus	mRNA	9507	13233	.	-	.	ID=Dca20351.1;Parent=Dca20351
scaffold2085	Augustus	exon	9507	10759	.	-	.	ID=Dca20351.1.exon1;Parent=Dca20351.1
scaffold2085	Augustus	exon	10893	11244	.	-	.	ID=Dca20351.1.exon2;Parent=Dca20351.1
scaffold2085	Augustus	exon	12225	12269	.	-	.	ID=Dca20351.1.exon3;Parent=Dca20351.1
scaffold2085	Augustus	exon	12349	12563	.	-	.	ID=Dca20351.1.exon4;Parent=Dca20351.1
scaffold2085	Augustus	exon	12891	13233	.	-	.	ID=Dca20351.1.exon5;Parent=Dca20351.1