Dca20366.1
Annotation
- 4-exons
- f-1
- sp|Q8W378_ORYSJ#Putative tetratricopeptide repeat protein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0029C15.16#GO:0005488#1F0P0C
- Repeat List (scaffold2086)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca20366.1 |
185 |
229 |
247 |
12.95 |
45 |
69 |
2e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q8W378_ORYSJ |
425 |
471 |
548 |
8.57 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca20366.1 |
185 |
229 |
247 |
12.95 |
45 |
69 |
3e-13
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os10t0486900-01 |
113 |
159 |
237 |
19.83 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2086 |
Augustus |
mRNA |
37901 |
42124 |
. |
+ |
. |
ID=Dca20366.1;Parent=Dca20366 |
| scaffold2086 |
Augustus |
exon |
37901 |
38184 |
. |
+ |
. |
ID=Dca20366.1.exon1;Parent=Dca20366.1 |
| scaffold2086 |
Augustus |
exon |
38266 |
38455 |
. |
+ |
. |
ID=Dca20366.1.exon2;Parent=Dca20366.1 |
| scaffold2086 |
Augustus |
exon |
39348 |
39437 |
. |
+ |
. |
ID=Dca20366.1.exon3;Parent=Dca20366.1 |
| scaffold2086 |
Augustus |
exon |
41945 |
42124 |
. |
+ |
. |
ID=Dca20366.1.exon4;Parent=Dca20366.1 |
