Carnation DB

Dca20411.1

Annotation

5-exons
f-1
sp|Q0PY40_SOLLC#Putative polyprotein#Solanum lycopersicum (Tomato) (Lycopersicon esculentum)#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
Repeat List (scaffold209)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20411.1	68	605	605	40.82	538	40	2e-119
Target_name	Start	End	Length	Cov(%)
sp\|Q0PY40_SOLLC	615	1227	1428	42.92

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20411.1	258	605	605	24.95	348	43	1e-80
Target_name	Start	End	Length	Cov(%)
AT4G23160.1	36	385	1262	27.73

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold209	Augustus	mRNA	179085	181622	.	+	.	ID=Dca20411.1;Parent=Dca20411
scaffold209	Augustus	exon	179085	179192	.	+	.	ID=Dca20411.1.exon1;Parent=Dca20411.1
scaffold209	Augustus	exon	179279	179365	.	+	.	ID=Dca20411.1.exon2;Parent=Dca20411.1
scaffold209	Augustus	exon	179759	180084	.	+	.	ID=Dca20411.1.exon3;Parent=Dca20411.1
scaffold209	Augustus	exon	180253	180491	.	+	.	ID=Dca20411.1.exon4;Parent=Dca20411.1
scaffold209	Augustus	exon	180565	181622	.	+	.	ID=Dca20411.1.exon5;Parent=Dca20411.1