Carnation DB

Dca20524.1

Annotation

3-exons
f-1
sp|F6H5B1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_12s0028g03870#GO:0005488#1F0P0C
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr2:8926110-8927722 FORWARD LENGTH=490
Repeat List (scaffold21)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20524.1	16	457	483	36.43	442	38	1e-85
Target_name	Start	End	Length	Cov(%)
sp\|F6H5B1_VITVI	4	463	499	92.18

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20524.1	51	469	483	33.95	419	39	8e-75
Target_name	Start	End	Length	Cov(%)
AT2G20710.1	39	445	490	83.06

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold21	Augustus	mRNA	70377	72363	.	-	.	ID=Dca20524.1;Parent=Dca20524
scaffold21	Augustus	exon	70377	70667	.	-	.	ID=Dca20524.1.exon1;Parent=Dca20524.1
scaffold21	Augustus	exon	70747	71598	.	-	.	ID=Dca20524.1.exon2;Parent=Dca20524.1
scaffold21	Augustus	exon	72055	72363	.	-	.	ID=Dca20524.1.exon3;Parent=Dca20524.1
scaffold21	Augustus	mRNA	70377	71586	.	-	.	ID=Dca20524.2;Parent=Dca20524
scaffold21	Augustus	exon	70377	70667	.	-	.	ID=Dca20524.2.exon1;Parent=Dca20524.2
scaffold21	Augustus	exon	70747	71586	.	-	.	ID=Dca20524.2.exon2;Parent=Dca20524.2