Dca20529.1
Annotation
- 2-exons
- f-1
- sp|B9IIE6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_576429#GO:0005488#1F0P0C
- AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr2:8926110-8927722 FORWARD LENGTH=490
- Repeat List (scaffold21)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca20529.1 |
62 |
493 |
502 |
37.05 |
432 |
43 |
7e-101
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9IIE6_POPTR |
59 |
485 |
516 |
82.75 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca20529.1 |
50 |
469 |
502 |
33.46 |
420 |
40 |
1e-86
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G20710.1 |
39 |
455 |
490 |
85.1 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold21 |
Augustus |
mRNA |
109576 |
112234 |
. |
- |
. |
ID=Dca20529.1;Parent=Dca20529 |
| scaffold21 |
Augustus |
exon |
109576 |
110778 |
. |
- |
. |
ID=Dca20529.1.exon1;Parent=Dca20529.1 |
| scaffold21 |
Augustus |
exon |
111929 |
112234 |
. |
- |
. |
ID=Dca20529.1.exon2;Parent=Dca20529.1 |
