Carnation DB

Dca20560.1

Annotation

5-exons
f-1
sp|E0CUT0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_16s0050g01450#unknown#0F0P0C
AT4G21190.1 | Symbols: emb1417 | Pentatricopeptide repeat (PPR) superfamily protein | chr4:11292493-11293763 REVERSE LENGTH=307
Repeat List (scaffold21)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20560.1	51	315	315	57.46	265	69	3e-105
Target_name	Start	End	Length	Cov(%)
sp\|E0CUT0_VITVI	25	284	295	88.13

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20560.1	47	284	315	50.79	238	67	4e-93
Target_name	Start	End	Length	Cov(%)
AT4G21190.1	24	264	307	78.5

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold21	Augus-PASA	mRNA	351787	353963	.	+	.	ID=Dca20560.1;Parent=Dca20560
scaffold21	Augus-PASA	exon	351787	351948	.	+	.	ID=Dca20560.1.exon1;Parent=Dca20560.1
scaffold21	Augus-PASA	exon	352176	352274	.	+	.	ID=Dca20560.1.exon2;Parent=Dca20560.1
scaffold21	Augus-PASA	exon	352964	353107	.	+	.	ID=Dca20560.1.exon3;Parent=Dca20560.1
scaffold21	Augus-PASA	exon	353206	353418	.	+	.	ID=Dca20560.1.exon4;Parent=Dca20560.1
scaffold21	Augus-PASA	exon	353634	353963	.	+	.	ID=Dca20560.1.exon5;Parent=Dca20560.1