Carnation DB

Dca20744.1

Annotation

6-exons
f-1
sp|A9PI62_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_931364#GO:0005840;GO:0003735;GO:0006412#1F1P1C
AT3G44890.1 | Symbols: RPL9 | ribosomal protein L9 | chr3:16386505-16387963 FORWARD LENGTH=197
Repeat List (scaffold2108)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20744.1	1	199	199	72.36	199	73	1e-72
Target_name	Start	End	Length	Cov(%)
sp\|A9PI62_POPTR	1	198	198	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20744.1	1	199	199	69.34	199	69	1e-67
Target_name	Start	End	Length	Cov(%)
AT3G44890.1	1	197	197	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2108	Augustus	mRNA	6042	9732	.	-	.	ID=Dca20744.1;Parent=Dca20744
scaffold2108	Augustus	exon	6042	6162	.	-	.	ID=Dca20744.1.exon1;Parent=Dca20744.1
scaffold2108	Augus-PASA	exon	6635	6682	.	-	.	ID=Dca20744.1.exon2;Parent=Dca20744.1
scaffold2108	Augus-PASA	exon	6776	6873	.	-	.	ID=Dca20744.1.exon3;Parent=Dca20744.1
scaffold2108	Augus-PASA	exon	7787	7832	.	-	.	ID=Dca20744.1.exon4;Parent=Dca20744.1
scaffold2108	Augus-PASA	exon	8698	8825	.	-	.	ID=Dca20744.1.exon5;Parent=Dca20744.1
scaffold2108	Augus-PASA	exon	9574	9732	.	-	.	ID=Dca20744.1.exon6;Parent=Dca20744.1