Carnation DB

Dca20875.1

Annotation

19-exons
f-1
sp|F6HQ83_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0104g00020#GO:0005488#1F0P0C
AT5G19330.1 | Symbols: ARIA | ARM repeat protein interacting with ABF2 | chr5:6508095-6512701 REVERSE LENGTH=710
Repeat List (scaffold212)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20875.1	5	705	710	72.11	701	73	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HQ83_VITVI	7	699	705	98.29

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20875.1	49	701	710	68.73	653	75	0
Target_name	Start	End	Length	Cov(%)
AT5G19330.1	46	700	710	92.25

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold212	Augustus	mRNA	42871	48370	.	+	.	ID=Dca20875.1;Parent=Dca20875
scaffold212	Augustus	exon	42871	43132	.	+	.	ID=Dca20875.1.exon1;Parent=Dca20875.1
scaffold212	Augustus	exon	43246	43397	.	+	.	ID=Dca20875.1.exon2;Parent=Dca20875.1
scaffold212	Augustus	exon	44364	44536	.	+	.	ID=Dca20875.1.exon3;Parent=Dca20875.1
scaffold212	Augustus	exon	44627	44747	.	+	.	ID=Dca20875.1.exon4;Parent=Dca20875.1
scaffold212	Augustus	exon	44826	44900	.	+	.	ID=Dca20875.1.exon5;Parent=Dca20875.1
scaffold212	Augustus	exon	45004	45098	.	+	.	ID=Dca20875.1.exon6;Parent=Dca20875.1
scaffold212	Augustus	exon	45221	45296	.	+	.	ID=Dca20875.1.exon7;Parent=Dca20875.1
scaffold212	Augustus	exon	45419	45526	.	+	.	ID=Dca20875.1.exon8;Parent=Dca20875.1
scaffold212	Augustus	exon	45696	45824	.	+	.	ID=Dca20875.1.exon9;Parent=Dca20875.1
scaffold212	Augustus	exon	45953	46021	.	+	.	ID=Dca20875.1.exon10;Parent=Dca20875.1
scaffold212	Augustus	exon	46387	46446	.	+	.	ID=Dca20875.1.exon11;Parent=Dca20875.1
scaffold212	Augustus	exon	46648	46771	.	+	.	ID=Dca20875.1.exon12;Parent=Dca20875.1
scaffold212	Augustus	exon	46946	47085	.	+	.	ID=Dca20875.1.exon13;Parent=Dca20875.1
scaffold212	Augus-PASA	exon	47202	47265	.	+	.	ID=Dca20875.1.exon14;Parent=Dca20875.1
scaffold212	Augus-PASA	exon	47351	47430	.	+	.	ID=Dca20875.1.exon15;Parent=Dca20875.1
scaffold212	Augus-PASA	exon	47570	47634	.	+	.	ID=Dca20875.1.exon16;Parent=Dca20875.1
scaffold212	Augus-PASA	exon	47720	47837	.	+	.	ID=Dca20875.1.exon17;Parent=Dca20875.1
scaffold212	Augus-PASA	exon	47961	48085	.	+	.	ID=Dca20875.1.exon18;Parent=Dca20875.1
scaffold212	Augus-PASA	exon	48274	48370	.	+	.	ID=Dca20875.1.exon19;Parent=Dca20875.1