Carnation DB

Dca20876.1

Annotation

5-exons
f-1
sp|F6H645_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_03s0091g01030#GO:0000786;GO:0005634;GO:0006334;GO:0006355#0F2P2C
sp|B9IBK2_POPTR#Single myb histone#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=SMH906#GO:0000786;GO:0005634;GO:0006334;GO:0006355#0F2P2C
Repeat List (scaffold212)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20876.1	1	234	291	41.23	234	51	5e-59
Target_name	Start	End	Length	Cov(%)
sp\|F6H645_VITVI	77	314	376	63.29

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20876.1	1	234	291	41.58	234	49	2e-55
Target_name	Start	End	Length	Cov(%)
Os01t0589300-01	1	237	301	78.73

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold212	Augustus	mRNA	50891	55207	.	+	.	ID=Dca20876.1;Parent=Dca20876
scaffold212	Augustus	exon	50891	51040	.	+	.	ID=Dca20876.1.exon1;Parent=Dca20876.1
scaffold212	Augus-PASA	exon	51330	51541	.	+	.	ID=Dca20876.1.exon2;Parent=Dca20876.1
scaffold212	Augus-PASA	exon	51995	52079	.	+	.	ID=Dca20876.1.exon3;Parent=Dca20876.1
scaffold212	Augus-PASA	exon	53519	53602	.	+	.	ID=Dca20876.1.exon4;Parent=Dca20876.1
scaffold212	Augustus	exon	54864	55207	.	+	.	ID=Dca20876.1.exon5;Parent=Dca20876.1