Carnation DB

Dca20907.1

Annotation

7-exons
f-1
sp|E0CSL3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_19s0014g02840#GO:0005737;GO:0008690;GO:0009103#1F1P1C
sp|B9RU62_RICCO#Cmp-2-keto-3-deoctulosonate (Cmp-kdo) cytidyltransferase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1632840#GO:0005737;GO:0008690;GO:0009103#1F1P1C
Repeat List (scaffold2121)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20907.1	5	267	267	81.27	263	74	4e-115
Target_name	Start	End	Length	Cov(%)
sp\|E0CSL3_VITVI	4	297	297	98.98

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20907.1	18	267	267	73.03	250	70	2e-110
Target_name	Start	End	Length	Cov(%)
AT1G53000.1	12	290	290	96.2

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2121	Augustus	mRNA	34577	37852	.	-	.	ID=Dca20907.1;Parent=Dca20907
scaffold2121	Augustus	exon	34577	34669	.	-	.	ID=Dca20907.1.exon1;Parent=Dca20907.1
scaffold2121	Augustus	exon	35012	35122	.	-	.	ID=Dca20907.1.exon2;Parent=Dca20907.1
scaffold2121	Augustus	exon	35210	35261	.	-	.	ID=Dca20907.1.exon3;Parent=Dca20907.1
scaffold2121	Augustus	exon	35367	35506	.	-	.	ID=Dca20907.1.exon4;Parent=Dca20907.1
scaffold2121	Augustus	exon	35752	35876	.	-	.	ID=Dca20907.1.exon5;Parent=Dca20907.1
scaffold2121	Augustus	exon	36900	36945	.	-	.	ID=Dca20907.1.exon6;Parent=Dca20907.1
scaffold2121	Augustus	exon	37616	37852	.	-	.	ID=Dca20907.1.exon7;Parent=Dca20907.1