Carnation DB

Dca20940.1

Annotation

7-exons
f-1
sp|B9RTK2_RICCO#Acireductone dioxygenase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0911070#GO:0005634;GO:0010309#1F0P1C
Repeat List (scaffold2125)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20940.1	6	201	201	81.59	196	84	9e-96
Target_name	Start	End	Length	Cov(%)
sp\|B9RTK2_RICCO	5	200	200	98

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20940.1	3	201	201	79.1	199	80	4e-92
Target_name	Start	End	Length	Cov(%)
AT4G14710.5	4	201	201	98.5

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2125	Augus-PASA	mRNA	13100	17902	.	+	.	ID=Dca20940.1;Parent=Dca20940
scaffold2125	Augus-PASA	exon	13100	13120	.	+	.	ID=Dca20940.1.exon1;Parent=Dca20940.1
scaffold2125	Augus-PASA	exon	16350	16461	.	+	.	ID=Dca20940.1.exon2;Parent=Dca20940.1
scaffold2125	Augus-PASA	exon	16874	16968	.	+	.	ID=Dca20940.1.exon3;Parent=Dca20940.1
scaffold2125	Augus-PASA	exon	17049	17163	.	+	.	ID=Dca20940.1.exon4;Parent=Dca20940.1
scaffold2125	Augus-PASA	exon	17317	17441	.	+	.	ID=Dca20940.1.exon5;Parent=Dca20940.1
scaffold2125	Augus-PASA	exon	17684	17754	.	+	.	ID=Dca20940.1.exon6;Parent=Dca20940.1
scaffold2125	Augus-PASA	exon	17836	17902	.	+	.	ID=Dca20940.1.exon7;Parent=Dca20940.1