Dca21102.1
Annotation
- 4-exons
- f-1
- sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold214)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca21102.1 |
100 |
281 |
281 |
38.79 |
182 |
60 |
6e-58
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|G9FIF2_BETVU |
907 |
1089 |
1553 |
11.78 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca21102.1 |
100 |
196 |
281 |
12.09 |
97 |
36 |
5e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
900 |
996 |
1539 |
6.3 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold214 |
Augustus |
mRNA |
81484 |
90731 |
. |
+ |
. |
ID=Dca21102.1;Parent=Dca21102 |
| scaffold214 |
Augustus |
exon |
81484 |
81582 |
. |
+ |
. |
ID=Dca21102.1.exon1;Parent=Dca21102.1 |
| scaffold214 |
Augustus |
exon |
84623 |
84726 |
. |
+ |
. |
ID=Dca21102.1.exon2;Parent=Dca21102.1 |
| scaffold214 |
Augustus |
exon |
85902 |
85992 |
. |
+ |
. |
ID=Dca21102.1.exon3;Parent=Dca21102.1 |
| scaffold214 |
Augustus |
exon |
90180 |
90731 |
. |
+ |
. |
ID=Dca21102.1.exon4;Parent=Dca21102.1 |
