Carnation DB

Dca2112.1

Annotation

5-exons
f-1
sp|B9IL48_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_910433#GO:0016021;GO:0005524;GO:0004674#2F0P1C
Os11t0490200-00 Protein kinase, catalytic domain domain containing protein.
Repeat List (scaffold107)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2112.1	1005	1117	1283	4.13	113	47	5e-19
Target_name	Start	End	Length	Cov(%)
sp\|B9IL48_POPTR	606	713	1026	10.52

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2112.1	969	1143	1283	4.13	175	30	8e-14
Target_name	Start	End	Length	Cov(%)
Os11t0490200-00	615	774	1078	14.84

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold107	Augustus	mRNA	95743	103712	.	+	.	ID=Dca2112.1;Parent=Dca2112
scaffold107	Augustus	exon	95743	98407	.	+	.	ID=Dca2112.1.exon1;Parent=Dca2112.1
scaffold107	Augustus	exon	98826	99173	.	+	.	ID=Dca2112.1.exon2;Parent=Dca2112.1
scaffold107	Augustus	exon	102269	102607	.	+	.	ID=Dca2112.1.exon3;Parent=Dca2112.1
scaffold107	Augustus	exon	103078	103437	.	+	.	ID=Dca2112.1.exon4;Parent=Dca2112.1
scaffold107	Augustus	exon	103573	103712	.	+	.	ID=Dca2112.1.exon5;Parent=Dca2112.1