Carnation DB

Dca21166.1

Annotation

5-exons
f-1
sp|F6HYD4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_09s0002g04080#GO:0005634;GO:0046983;GO:0009734;GO:0006355;GO:0006351#1F3P1C
AT4G29080.1 | Symbols: PAP2, IAA27 | phytochrome-associated protein 2 | chr4:14323665-14325213 REVERSE LENGTH=305
Repeat List (scaffold2145)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21166.1	12	249	249	59.83	238	54	6e-68
Target_name	Start	End	Length	Cov(%)
sp\|F6HYD4_VITVI	44	317	320	85.62

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21166.1	16	247	249	50.6	232	46	2e-54
Target_name	Start	End	Length	Cov(%)
AT4G29080.1	43	300	305	84.59

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2145	Augus-PASA	mRNA	14685	16483	.	+	.	ID=Dca21166.1;Parent=Dca21166
scaffold2145	Augus-PASA	exon	14685	15019	.	+	.	ID=Dca21166.1.exon1;Parent=Dca21166.1
scaffold2145	Augus-PASA	exon	15398	15627	.	+	.	ID=Dca21166.1.exon2;Parent=Dca21166.1
scaffold2145	Augus-PASA	exon	15855	15948	.	+	.	ID=Dca21166.1.exon3;Parent=Dca21166.1
scaffold2145	Augus-PASA	exon	16299	16360	.	+	.	ID=Dca21166.1.exon4;Parent=Dca21166.1
scaffold2145	Augus-PASA	exon	16455	16483	.	+	.	ID=Dca21166.1.exon5;Parent=Dca21166.1