Dca2121.1
Annotation
- 4-exons
- f-1
- sp|B9IL48_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_910433#GO:0016021;GO:0005524;GO:0004674#2F0P1C
- Repeat List (scaffold107)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2121.1 |
91 |
190 |
215 |
24.65 |
100 |
51 |
1e-21
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9IL48_POPTR |
910 |
1012 |
1026 |
10.03 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2121.1 |
91 |
184 |
215 |
20.93 |
94 |
43 |
5e-19
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os02t0215900-01 |
219 |
324 |
330 |
32.12 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold107 |
Augustus |
mRNA |
172453 |
175011 |
. |
+ |
. |
ID=Dca2121.1;Parent=Dca2121 |
| scaffold107 |
Augustus |
exon |
172453 |
172602 |
. |
+ |
. |
ID=Dca2121.1.exon1;Parent=Dca2121.1 |
| scaffold107 |
Augustus |
exon |
173624 |
173695 |
. |
+ |
. |
ID=Dca2121.1.exon2;Parent=Dca2121.1 |
| scaffold107 |
Augustus |
exon |
173757 |
173806 |
. |
+ |
. |
ID=Dca2121.1.exon3;Parent=Dca2121.1 |
| scaffold107 |
Augustus |
exon |
174636 |
175011 |
. |
+ |
. |
ID=Dca2121.1.exon4;Parent=Dca2121.1 |
