Carnation DB

Dca21216.1

Annotation

17-exons
f-1
sp|D7L293_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_478789#GO:0005737;GO:0005524;GO:0042026#1F1P1C
AT3G13860.1 | Symbols: HSP60-3A | heat shock protein 60-3A | chr3:4561704-4565133 REVERSE LENGTH=572
Repeat List (scaffold215)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21216.1	128	692	692	63.29	565	78	0
Target_name	Start	End	Length	Cov(%)
sp\|D7L293_ARALL	21	572	572	96.5

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21216.1	128	692	692	63	565	78	0
Target_name	Start	End	Length	Cov(%)
AT3G13860.1	21	572	572	96.5

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold215	Augustus	mRNA	181118	189180	.	+	.	ID=Dca21216.1;Parent=Dca21216
scaffold215	Augustus	exon	181118	181498	.	+	.	ID=Dca21216.1.exon1;Parent=Dca21216.1
scaffold215	Augustus	exon	184713	184844	.	+	.	ID=Dca21216.1.exon2;Parent=Dca21216.1
scaffold215	Augustus	exon	185178	185337	.	+	.	ID=Dca21216.1.exon3;Parent=Dca21216.1
scaffold215	Augustus	exon	185595	185770	.	+	.	ID=Dca21216.1.exon4;Parent=Dca21216.1
scaffold215	Augustus	exon	185862	185957	.	+	.	ID=Dca21216.1.exon5;Parent=Dca21216.1
scaffold215	Augustus	exon	186064	186168	.	+	.	ID=Dca21216.1.exon6;Parent=Dca21216.1
scaffold215	Augustus	exon	186315	186437	.	+	.	ID=Dca21216.1.exon7;Parent=Dca21216.1
scaffold215	Augustus	exon	186550	186639	.	+	.	ID=Dca21216.1.exon8;Parent=Dca21216.1
scaffold215	Augustus	exon	186895	186975	.	+	.	ID=Dca21216.1.exon9;Parent=Dca21216.1
scaffold215	Augustus	exon	187057	187125	.	+	.	ID=Dca21216.1.exon10;Parent=Dca21216.1
scaffold215	Augustus	exon	187217	187294	.	+	.	ID=Dca21216.1.exon11;Parent=Dca21216.1
scaffold215	Augustus	exon	187793	187888	.	+	.	ID=Dca21216.1.exon12;Parent=Dca21216.1
scaffold215	Augustus	exon	188000	188099	.	+	.	ID=Dca21216.1.exon13;Parent=Dca21216.1
scaffold215	Augustus	exon	188380	188483	.	+	.	ID=Dca21216.1.exon14;Parent=Dca21216.1
scaffold215	Augustus	exon	188575	188680	.	+	.	ID=Dca21216.1.exon15;Parent=Dca21216.1
scaffold215	Augustus	exon	188898	188976	.	+	.	ID=Dca21216.1.exon16;Parent=Dca21216.1
scaffold215	Augustus	exon	189078	189180	.	+	.	ID=Dca21216.1.exon17;Parent=Dca21216.1