Carnation DB

Dca21220.1

Annotation

6-exons
f-1
sp|F6GW93_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0061g00540#GO:0015031#0F1P0C
AT5G22950.1 | Symbols: VPS24.1 | SNF7 family protein | chr5:7681380-7682720 FORWARD LENGTH=229
Repeat List (scaffold215)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21220.1	1	228	228	81.57	228	82	3e-94
Target_name	Start	End	Length	Cov(%)
sp\|F6GW93_VITVI	1	228	228	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21220.1	1	228	228	76.75	228	77	3e-90
Target_name	Start	End	Length	Cov(%)
AT5G22950.1	1	229	229	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold215	Augus-PASA	mRNA	202183	204419	.	-	.	ID=Dca21220.1;Parent=Dca21220
scaffold215	Augus-PASA	exon	202183	202266	.	-	.	ID=Dca21220.1.exon1;Parent=Dca21220.1
scaffold215	Augus-PASA	exon	202635	202823	.	-	.	ID=Dca21220.1.exon2;Parent=Dca21220.1
scaffold215	Augus-PASA	exon	202990	203111	.	-	.	ID=Dca21220.1.exon3;Parent=Dca21220.1
scaffold215	Augus-PASA	exon	203320	203422	.	-	.	ID=Dca21220.1.exon4;Parent=Dca21220.1
scaffold215	Augus-PASA	exon	204087	204163	.	-	.	ID=Dca21220.1.exon5;Parent=Dca21220.1
scaffold215	Augustus	exon	204308	204419	.	-	.	ID=Dca21220.1.exon6;Parent=Dca21220.1