Carnation DB

Dca21371.1

Annotation

6-exons
f-1
sp|B9T334_RICCO#Ubiquitin-conjugating enzyme E2, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0149570#GO:0005524;GO:0004842#2F0P0C
Repeat List (scaffold2161)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21371.1	49	196	196	73.97	148	98	5e-83
Target_name	Start	End	Length	Cov(%)
sp\|B9T334_RICCO	1	148	148	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21371.1	46	196	196	73.46	151	96	6e-83
Target_name	Start	End	Length	Cov(%)
AT4G27960.2	28	178	178	84.83

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2161	Augus-PASA	mRNA	3274	6518	.	-	.	ID=Dca21371.1;Parent=Dca21371
scaffold2161	Augus-PASA	exon	3274	3417	.	-	.	ID=Dca21371.1.exon1;Parent=Dca21371.1
scaffold2161	Augus-PASA	exon	3915	4019	.	-	.	ID=Dca21371.1.exon2;Parent=Dca21371.1
scaffold2161	Augus-PASA	exon	4289	4416	.	-	.	ID=Dca21371.1.exon3;Parent=Dca21371.1
scaffold2161	Augus-PASA	exon	5319	5407	.	-	.	ID=Dca21371.1.exon4;Parent=Dca21371.1
scaffold2161	Augustus	exon	5539	5629	.	-	.	ID=Dca21371.1.exon5;Parent=Dca21371.1
scaffold2161	Augustus	exon	6485	6518	.	-	.	ID=Dca21371.1.exon6;Parent=Dca21371.1