Carnation DB

Dca21385.1

Annotation

8-exons
f-1
sp|B9GMY2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1066343#GO:0019867;GO:0015450;GO:0006886#1F1P1C
Repeat List (scaffold2162)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21385.1	130	819	819	71.18	690	85	0
Target_name	Start	End	Length	Cov(%)
sp\|B9GMY2_POPTR	123	813	813	84.99

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21385.1	131	819	819	71.55	689	85	0
Target_name	Start	End	Length	Cov(%)
AT3G46740.1	129	818	818	84.35

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2162	Augustus	mRNA	37814	43309	.	+	.	ID=Dca21385.1;Parent=Dca21385
scaffold2162	Augustus	exon	37814	38580	.	+	.	ID=Dca21385.1.exon1;Parent=Dca21385.1
scaffold2162	Augustus	exon	39732	40158	.	+	.	ID=Dca21385.1.exon2;Parent=Dca21385.1
scaffold2162	Augustus	exon	40941	41162	.	+	.	ID=Dca21385.1.exon3;Parent=Dca21385.1
scaffold2162	Augus-PASA	exon	41268	41375	.	+	.	ID=Dca21385.1.exon4;Parent=Dca21385.1
scaffold2162	Augus-PASA	exon	41853	42044	.	+	.	ID=Dca21385.1.exon5;Parent=Dca21385.1
scaffold2162	Augus-PASA	exon	42142	42390	.	+	.	ID=Dca21385.1.exon6;Parent=Dca21385.1
scaffold2162	Augus-PASA	exon	42598	42852	.	+	.	ID=Dca21385.1.exon7;Parent=Dca21385.1
scaffold2162	Augus-PASA	exon	43070	43309	.	+	.	ID=Dca21385.1.exon8;Parent=Dca21385.1