Carnation DB

Dca2141.1

Annotation

7-exons
f-1
sp|E0CT36_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_19s0014g04960#GO:0005524;GO:0004674#2F0P0C
sp|B9S9Z6_RICCO#Serine/threonine-specific protein kinase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0180410#GO:0005524;GO:0004709#2F0P0C
Repeat List (scaffold1070)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2141.1	6	438	443	72.68	433	75	0
Target_name	Start	End	Length	Cov(%)
sp\|E0CT36_VITVI	5	423	430	97.44

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2141.1	6	399	443	64.55	394	73	2e-170
Target_name	Start	End	Length	Cov(%)
AT5G54590.2	5	387	440	87.04

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1070	Augustus	mRNA	78953	82528	.	-	.	ID=Dca2141.1;Parent=Dca2141
scaffold1070	Augustus	exon	78953	79288	.	-	.	ID=Dca2141.1.exon1;Parent=Dca2141.1
scaffold1070	Augustus	exon	79626	79829	.	-	.	ID=Dca2141.1.exon2;Parent=Dca2141.1
scaffold1070	Augustus	exon	79990	80061	.	-	.	ID=Dca2141.1.exon3;Parent=Dca2141.1
scaffold1070	Augustus	exon	80155	80270	.	-	.	ID=Dca2141.1.exon4;Parent=Dca2141.1
scaffold1070	Augustus	exon	81400	81526	.	-	.	ID=Dca2141.1.exon5;Parent=Dca2141.1
scaffold1070	Augustus	exon	81644	81797	.	-	.	ID=Dca2141.1.exon6;Parent=Dca2141.1
scaffold1070	Augustus	exon	82206	82528	.	-	.	ID=Dca2141.1.exon7;Parent=Dca2141.1