Dca21666.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold2187)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca21666.1 |
2 |
125 |
141 |
56.02 |
124 |
53 |
3e-36
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
1340 |
1490 |
1501 |
10.05 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca21666.1 |
2 |
124 |
141 |
39 |
123 |
37 |
7e-26
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0627900-01 |
77 |
226 |
230 |
65.21 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2187 |
Augustus |
mRNA |
48520 |
49027 |
. |
- |
. |
ID=Dca21666.1;Parent=Dca21666 |
| scaffold2187 |
Augustus |
exon |
48520 |
48746 |
. |
- |
. |
ID=Dca21666.1.exon1;Parent=Dca21666.1 |
| scaffold2187 |
Augustus |
exon |
48829 |
49027 |
. |
- |
. |
ID=Dca21666.1.exon2;Parent=Dca21666.1 |
