Carnation DB

Dca21809.1

Annotation

7-exons
f-1
sp|D7UA51_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_14s0060g00920#unknown#0F0P0C
AT1G09280.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT2G40760.1); Has 5925 Blast hits to 5912 proteins in 1592 species: Archae - 0; Bacteria - 2946; Metazoa - 156; Fungi - 408; Plants - 229; Viruses - 0; Other Eukaryotes - 2186 (source: NCBI BLink). | chr1:2998209-3001253 REVERSE LENGTH=581
Repeat List (scaffold22)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21809.1	13	607	608	65.13	595	65	0
Target_name	Start	End	Length	Cov(%)
sp\|D7UA51_VITVI	11	612	613	98.2

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21809.1	3	607	608	59.21	605	60	0
Target_name	Start	End	Length	Cov(%)
AT1G09280.1	11	580	581	98.1

seqname	source	feature	start	end	score	strand	frame	group
scaffold22	Augustus	mRNA	41142	45859	.	+	.	ID=Dca21809.1;Parent=Dca21809
scaffold22	Augustus	exon	41142	41595	.	+	.	ID=Dca21809.1.exon1;Parent=Dca21809.1
scaffold22	Augustus	exon	42659	42857	.	+	.	ID=Dca21809.1.exon2;Parent=Dca21809.1
scaffold22	Augustus	exon	42963	43044	.	+	.	ID=Dca21809.1.exon3;Parent=Dca21809.1
scaffold22	Augustus	exon	43348	43430	.	+	.	ID=Dca21809.1.exon4;Parent=Dca21809.1
scaffold22	Augustus	exon	44304	44436	.	+	.	ID=Dca21809.1.exon5;Parent=Dca21809.1
scaffold22	Augustus	exon	44797	44938	.	+	.	ID=Dca21809.1.exon6;Parent=Dca21809.1
scaffold22	Augustus	exon	45126	45859	.	+	.	ID=Dca21809.1.exon7;Parent=Dca21809.1