Carnation DB

Dca21853.1

Annotation

7-exons
f-1
sp|B9N4N9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_784826#unknown#0F0P0C
Os02t0177800-02 Similar to Calmodulin-binding protein 60-B (Fragment).
Repeat List (scaffold22)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21853.1	10	548	555	35.67	539	37	1e-89
Target_name	Start	End	Length	Cov(%)
sp\|B9N4N9_POPTR	42	575	582	91.75

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21853.1	10	552	555	34.95	543	33	1e-73
Target_name	Start	End	Length	Cov(%)
Os02t0177800-02	41	619	625	92.64

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold22	Augustus	mRNA	336254	340141	.	-	.	ID=Dca21853.1;Parent=Dca21853
scaffold22	Augustus	exon	336254	336762	.	-	.	ID=Dca21853.1.exon1;Parent=Dca21853.1
scaffold22	Augustus	exon	336853	337024	.	-	.	ID=Dca21853.1.exon2;Parent=Dca21853.1
scaffold22	Augustus	exon	337116	337319	.	-	.	ID=Dca21853.1.exon3;Parent=Dca21853.1
scaffold22	Augustus	exon	337411	337571	.	-	.	ID=Dca21853.1.exon4;Parent=Dca21853.1
scaffold22	Augustus	exon	337666	338165	.	-	.	ID=Dca21853.1.exon5;Parent=Dca21853.1
scaffold22	Augustus	exon	338586	338635	.	-	.	ID=Dca21853.1.exon6;Parent=Dca21853.1
scaffold22	Augustus	exon	340070	340141	.	-	.	ID=Dca21853.1.exon7;Parent=Dca21853.1