Carnation DB

Dca21896.1

Annotation

12-exons
f-1
sp|D7SPT7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0023g00150#GO:0016021;GO:0005488;GO:0051205#1F1P1C
sp|B9RFU8_RICCO#Cytochrome oxidase biogenesis protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1437450#GO:0016021;GO:0005488;GO:0051205#1F1P1C
Repeat List (scaffold220)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21896.1	1	518	518	44.78	518	40	1e-99
Target_name	Start	End	Length	Cov(%)
sp\|D7SPT7_VITVI	1	572	572	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21896.1	1	494	518	41.69	494	39	2e-92
Target_name	Start	End	Length	Cov(%)
AT3G44370.1	1	545	566	96.28

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold220	Augustus	mRNA	170833	176251	.	+	.	ID=Dca21896.1;Parent=Dca21896
scaffold220	Augustus	exon	170833	171209	.	+	.	ID=Dca21896.1.exon1;Parent=Dca21896.1
scaffold220	Augustus	exon	171893	171999	.	+	.	ID=Dca21896.1.exon2;Parent=Dca21896.1
scaffold220	Augustus	exon	172719	172846	.	+	.	ID=Dca21896.1.exon3;Parent=Dca21896.1
scaffold220	Augustus	exon	172927	172998	.	+	.	ID=Dca21896.1.exon4;Parent=Dca21896.1
scaffold220	Augustus	exon	173219	173320	.	+	.	ID=Dca21896.1.exon5;Parent=Dca21896.1
scaffold220	Augustus	exon	173808	173870	.	+	.	ID=Dca21896.1.exon6;Parent=Dca21896.1
scaffold220	Augustus	exon	174809	174976	.	+	.	ID=Dca21896.1.exon7;Parent=Dca21896.1
scaffold220	Augustus	exon	175063	175118	.	+	.	ID=Dca21896.1.exon8;Parent=Dca21896.1
scaffold220	Augustus	exon	175211	175328	.	+	.	ID=Dca21896.1.exon9;Parent=Dca21896.1
scaffold220	Augustus	exon	175462	175551	.	+	.	ID=Dca21896.1.exon10;Parent=Dca21896.1
scaffold220	Augustus	exon	175890	175999	.	+	.	ID=Dca21896.1.exon11;Parent=Dca21896.1
scaffold220	Augustus	exon	176086	176251	.	+	.	ID=Dca21896.1.exon12;Parent=Dca21896.1