Carnation DB

Dca2198.1

Annotation

9-exons
f-1
sp|D7T014_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_12s0034g01410#GO:0016021;GO:0004252;GO:0006508#1F1P1C
sp|B9SZJ8_RICCO#KOM, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0065580#GO:0016021;GO:0004252;GO:0006508#1F1P1C
Repeat List (scaffold1073)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2198.1	25	328	332	53.61	304	56	7e-85
Target_name	Start	End	Length	Cov(%)
sp\|D7T014_VITVI	11	330	330	96.96

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2198.1	22	325	332	49.39	304	50	7e-81
Target_name	Start	End	Length	Cov(%)
AT1G25290.1	8	335	343	95.62

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1073	Augustus	mRNA	59033	66550	.	-	.	ID=Dca2198.1;Parent=Dca2198
scaffold1073	Augustus	exon	59033	59182	.	-	.	ID=Dca2198.1.exon1;Parent=Dca2198.1
scaffold1073	Augustus	exon	59668	59709	.	-	.	ID=Dca2198.1.exon2;Parent=Dca2198.1
scaffold1073	Augustus	exon	61013	61111	.	-	.	ID=Dca2198.1.exon3;Parent=Dca2198.1
scaffold1073	Augustus	exon	62936	63003	.	-	.	ID=Dca2198.1.exon4;Parent=Dca2198.1
scaffold1073	Augus-PASA	exon	63253	63349	.	-	.	ID=Dca2198.1.exon5;Parent=Dca2198.1
scaffold1073	Augus-PASA	exon	63434	63514	.	-	.	ID=Dca2198.1.exon6;Parent=Dca2198.1
scaffold1073	Augus-PASA	exon	63599	63653	.	-	.	ID=Dca2198.1.exon7;Parent=Dca2198.1
scaffold1073	Augus-PASA	exon	64826	65046	.	-	.	ID=Dca2198.1.exon8;Parent=Dca2198.1
scaffold1073	Augus-PASA	exon	66365	66550	.	-	.	ID=Dca2198.1.exon9;Parent=Dca2198.1