Dca22208.1
Annotation
- 3-exons
- f-166
- sp|F6GYT5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0117g00180#GO:0005488#1F0P0C
- AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr5:23195609-23198524 REVERSE LENGTH=971
- Repeat List (scaffold223)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22208.1 |
108 |
313 |
422 |
14.69 |
206 |
31 |
4e-23
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6GYT5_VITVI |
122 |
327 |
993 |
20.74 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22208.1 |
108 |
336 |
422 |
15.87 |
229 |
30 |
1e-24
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G57250.1 |
206 |
432 |
971 |
23.37 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold223 |
PASA |
mRNA |
99710 |
104888 |
. |
+ |
. |
ID=Dca22208.1;Parent=Dca22208 |
| scaffold223 |
PASA |
exon |
99710 |
99774 |
. |
+ |
. |
ID=Dca22208.1.exon1;Parent=Dca22208.1 |
| scaffold223 |
PASA |
exon |
103007 |
103061 |
. |
+ |
. |
ID=Dca22208.1.exon2;Parent=Dca22208.1 |
| scaffold223 |
PASA |
exon |
103376 |
104888 |
. |
+ |
. |
ID=Dca22208.1.exon3;Parent=Dca22208.1 |
