Dca22214.1
Annotation
- 3-exons
- f-1
- sp|B9HB36_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_762935#GO:0005622;GO:0003676;GO:0008270#2F0P1C
- Os06t0651300-01 Zinc finger, U1-type domain containing protein.
- Repeat List (scaffold223)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22214.1 |
147 |
343 |
455 |
18.9 |
197 |
36 |
6e-23
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HB36_POPTR |
4 |
233 |
291 |
79.03 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22214.1 |
4 |
90 |
455 |
8.35 |
87 |
44 |
2e-10
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G24030.1 |
19 |
92 |
455 |
16.26 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold223 |
Augustus |
mRNA |
161525 |
165168 |
. |
+ |
. |
ID=Dca22214.1;Parent=Dca22214 |
| scaffold223 |
Augustus |
exon |
161525 |
161594 |
. |
+ |
. |
ID=Dca22214.1.exon1;Parent=Dca22214.1 |
| scaffold223 |
Augustus |
exon |
161684 |
162048 |
. |
+ |
. |
ID=Dca22214.1.exon2;Parent=Dca22214.1 |
| scaffold223 |
Augustus |
exon |
164236 |
165168 |
. |
+ |
. |
ID=Dca22214.1.exon3;Parent=Dca22214.1 |
