Dca22415.1
Annotation
- 4-exons
- f-1
- sp|B9I931_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_824056#unknown#0F0P0C
- sp|B9SVF1_RICCO#Synovial sarcoma associated ss18 protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0131100#unknown#0F0P0C
- Repeat List (scaffold2248)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22415.1 |
7 |
192 |
192 |
65.1 |
186 |
60 |
6e-53
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9I931_POPTR |
5 |
206 |
208 |
97.11 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22415.1 |
4 |
190 |
192 |
56.77 |
187 |
49 |
6e-36
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G00850.1 |
2 |
221 |
223 |
98.65 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2248 |
Augustus |
mRNA |
35610 |
38383 |
. |
+ |
. |
ID=Dca22415.1;Parent=Dca22415 |
| scaffold2248 |
Augustus |
exon |
35610 |
35693 |
. |
+ |
. |
ID=Dca22415.1.exon1;Parent=Dca22415.1 |
| scaffold2248 |
Augustus |
exon |
37328 |
37404 |
. |
+ |
. |
ID=Dca22415.1.exon2;Parent=Dca22415.1 |
| scaffold2248 |
Augustus |
exon |
37878 |
37962 |
. |
+ |
. |
ID=Dca22415.1.exon3;Parent=Dca22415.1 |
| scaffold2248 |
Augustus |
exon |
38051 |
38383 |
. |
+ |
. |
ID=Dca22415.1.exon4;Parent=Dca22415.1 |
