Dca22554.1
Annotation
- 3-exons
- f-1
- sp|F4NCG1_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Os06t0484800-00 Reverse transcriptase domain containing protein.
- Repeat List (scaffold226)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22554.1 |
293 |
504 |
507 |
19.13 |
212 |
46 |
1e-51
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCG1_BETVU |
570 |
781 |
1110 |
19.09 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22554.1 |
290 |
506 |
507 |
12.82 |
217 |
30 |
4e-20
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
477 |
693 |
857 |
25.32 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold226 |
Augustus |
mRNA |
202582 |
204518 |
. |
+ |
. |
ID=Dca22554.1;Parent=Dca22554 |
| scaffold226 |
Augustus |
exon |
202582 |
202728 |
. |
+ |
. |
ID=Dca22554.1.exon1;Parent=Dca22554.1 |
| scaffold226 |
Augustus |
exon |
202810 |
203484 |
. |
+ |
. |
ID=Dca22554.1.exon2;Parent=Dca22554.1 |
| scaffold226 |
Augustus |
exon |
203817 |
204518 |
. |
+ |
. |
ID=Dca22554.1.exon3;Parent=Dca22554.1 |
