Dca2265.1
Annotation
- 3-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold10761)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2265.1 |
84 |
434 |
434 |
47.46 |
351 |
59 |
3e-121
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
341 |
691 |
1501 |
23.38 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2265.1 |
113 |
434 |
434 |
25.11 |
322 |
34 |
6e-52
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
55 |
380 |
707 |
46.11 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold10761 |
Augustus |
mRNA |
1 |
2432 |
. |
- |
. |
ID=Dca2265.1;Parent=Dca2265 |
| scaffold10761 |
Augustus |
exon |
1 |
1041 |
. |
- |
. |
ID=Dca2265.1.exon1;Parent=Dca2265.1 |
| scaffold10761 |
Augustus |
exon |
1155 |
1292 |
. |
- |
. |
ID=Dca2265.1.exon2;Parent=Dca2265.1 |
| scaffold10761 |
Augustus |
exon |
2310 |
2432 |
. |
- |
. |
ID=Dca2265.1.exon3;Parent=Dca2265.1 |
