Dca22690.1
Annotation
- 3-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold2272)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22690.1 |
281 |
582 |
582 |
28.35 |
302 |
54 |
2e-90
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
187 |
491 |
964 |
31.63 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22690.1 |
280 |
582 |
582 |
18.21 |
303 |
30 |
9e-36
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
583 |
935 |
1401 |
25.19 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2272 |
Augustus |
mRNA |
23801 |
26365 |
. |
+ |
. |
ID=Dca22690.1;Parent=Dca22690 |
| scaffold2272 |
Augustus |
exon |
23801 |
23963 |
. |
+ |
. |
ID=Dca22690.1.exon1;Parent=Dca22690.1 |
| scaffold2272 |
Augustus |
exon |
24058 |
24720 |
. |
+ |
. |
ID=Dca22690.1.exon2;Parent=Dca22690.1 |
| scaffold2272 |
Augustus |
exon |
25443 |
26365 |
. |
+ |
. |
ID=Dca22690.1.exon3;Parent=Dca22690.1 |
